Accession
MI0005947
Description
Physcomitrella patens
ppt-MIR1222b precursor miRNA
Sequence
477
reads,
22.0
reads per million, 10 experiments
gugcgucgaugcaacugcucuaaucauuuucgUACCAGUGUAUUCCUUCAAACcucuucucuugacuguagugguggcCUGAAGGAGUUCAUUGGUACAcaaaucuugagagcauggaggaaaauaga
.(((......)))..((((((....((((..(((((((((.(((((((((..((.((.(((......).)).)).))..))))))))).)))))))))..))))....))))))..............
.(((......)))..((((((....((((..(((((((((.(((((((((..((.((.(((......).)).)).))..))))))))).)))))))))..))))....))))))..............
Structure
gugcgucgaugcaac aauc uc U AA u u - uu
ugcucu auuu gUACCAGUG AUUCCUUCA Cc cu cu c g
|||||| |||| ||||||||| ||||||||| || || || |
acgaga uaaa CAUGGUUAC UGAGGAAGU gg gg ga g a
-agauaaaaggaggu guuc cA U Cc u u u uc
Annotation confidence
Medium
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Genome context
Chr15: 1335912-1336039 [-]
Database links
Mature ppt-miR1222b-5p
| Accession | MIMAT0053715 |
| Description | Physcomitrella patens ppt-miR1222b-5p mature miRNA |
| Sequence | 33 - UACCAGUGUAUUCCUUCAAAC - 53 |
| Evidence |
experimental
unknown |
Mature ppt-miR1222b-3p
| Accession | MIMAT0005089 |
| Description | Physcomitrella patens ppt-miR1222b-3p mature miRNA |
| Sequence | 79 - CUGAAGGAGUUCAUUGGUACA - 99 |
| Evidence |
experimental
454 [1] |
References
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