Accession
MI0005949
Description
Physcomitrella patens
ppt-MIR1222d precursor miRNA
Sequence
17538
reads,
716.0
reads per million, 10 experiments
cugauguuguuauuauuguuacgggcauucgugUGCUGGUGAACUCCUUCAUGCacaagugcggcucuucgcgcaccagcUUUAAGGGGUUCACUGGUAUAUgaaugcacauggcaugaucugaucacggg
(((.((.....(((((.((((.(.(((((((((((((((((((((((((...((....(((((........)))))..))...))))))))))))))))))))))))).).))))))))).....))))).
(((.((.....(((((.((((.(.(((((((((((((((((((((((((...((....(((((........)))))..))...))))))))))))))))))))))))).).))))))))).....))))).
Structure
- a uuguu u c g CAU acaa gcu cug ug auuau guua g gcauucgugUGCUGGUGAACUCCUU GC gugcg c ||| || ||||| |||| | ||||||||||||||||||||||||| || ||||| ggc ac uagua cggu c cguaagUAUAUGGUCACUUGGGGAA cg cacgc u g - uaguc - a a UUU --ac gcu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr14: 5466061-5466191 [-]
Database links
Mature ppt-miR1222d-5p
| Accession | MIMAT0053716 |
| Description | Physcomitrella patens ppt-miR1222d-5p mature miRNA |
| Sequence | 34 - UGCUGGUGAACUCCUUCAUGC - 54 |
| Evidence |
experimental
unknown |
Mature ppt-miR1222d-3p
| Accession | MIMAT0005091 |
| Description | Physcomitrella patens ppt-miR1222d-3p mature miRNA |
| Sequence | 81 - UUUAAGGGGUUCACUGGUAUAU - 102 |
| Evidence |
experimental
454 [1] |
References
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