Accession
MI0005954
Description
Physcomitrella patens
ppt-MIR1223e precursor miRNA
Sequence
ugaccaugacaagcaauggagcuucgacaaggguguuugacucuacuacccgugaaccccaucagauggagauauguggUUGUAGAGUCAUGCACCUCUGccgaggcuccugcuuuuuacuccuuu
......(((.(((((..(((((((((.((.((((((.(((((((((.(((((((..(.((((...)))).).)))).))).))))))))).)))))).)).)))))))))))))).))).......
......(((.(((((..(((((((((.((.((((((.(((((((((.(((((((..(.((((...)))).).)))).))).))))))))).)))))).)).)))))))))))))).))).......
Structure
-ugacca c au a a u u - aa c c
uga aagca ggagcuucg ca gggugu ugacucuac acc cgug c ccau
||| ||||| ||||||||| || |||||| ||||||||| ||| |||| | |||| a
auu uucgu ccucggagc GU UCCACG ACUGAGAUG Ugg guau g ggua
uuuccuc u -- c C U U u -a a g
Annotation confidence
Not enough data
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Genome context
Chr25: 8370886-8371011 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1223e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1223e
| Accession | MIMAT0005096 |
| Description | Physcomitrella patens ppt-miR1223e mature miRNA |
| Sequence | 80 - UUGUAGAGUCAUGCACCUCUG - 100 |
| Evidence |
experimental
454 [1] |
References
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