Accession
MI0005962
Description
Physcomitrella patens
ppt-MIR1023c precursor miRNA
Sequence
gcgcaguuacacagcuugcauuucgguguCCACUCUCUCCGUUUCCCUUCCcaugauggcuagccuugaguaaguacauauguuuugaacacauguaugcuugcuuaaaauccuuugucggAGGGAAUCGGAAAGAGUGUACaaugaauugcaagcuugauugauucg
...((((((...((((((((.((((.(((.((((((.((((.((((((.((.((((.((......(((((((((((.((((((.......)))))).)))))))))))...)).)))).)))))))).)))).)))))).))).)))).)))))))))))))).....
...((((((...((((((((.((((.(((.((((((.((((.((((((.((.((((.((......(((((((((((.((((((.......)))))).)))))))))))...)).)))).)))))))).)))).)))))).))).)))).)))))))))))))).....
Structure
--gcg cac u g C C U U c u cuagcc c uu
caguua agcuugca uucg ugu CACUCU UCCG UUCCCU CC auga gg uugaguaagua auaugu u
|||||| |||||||| |||| ||| |||||| |||| |||||| || |||| || ||||||||||| |||||| g
guuagu ucgaacgu aagu aCA GUGAGA AGGC AAGGGA gg uguu cc aauucguucgu uguaca a
gcuua --- u a U A U - c u ---uaa a ca
Annotation confidence
Not enough data
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Genome context
Chr10: 3231102-3231269 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1023c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1023c-5p
| Accession | MIMAT0005106 |
| Description | Physcomitrella patens ppt-miR1023c-5p mature miRNA |
| Sequence | 30 - CCACUCUCUCCGUUUCCCUUCC - 51 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1023c-3p
| Accession | MIMAT0005107 |
| Description | Physcomitrella patens ppt-miR1023c-3p mature miRNA |
| Sequence | 122 - AGGGAAUCGGAAAGAGUGUAC - 142 |
| Evidence |
experimental
454 [1] |
References
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