Accession
MI0005964
Description
Physcomitrella patens
ppt-MIR1024a precursor miRNA
Sequence
19438
reads,
817.0
reads per million, 10 experiments
ggacgagaucgcggccgucaugaguuuugucgaCGCCCUGCAAUUCAAGCAGACUcgauuacaauguuugccgccgacgucacgcaugucacgugguuauuuguacuucagUCUGGUUGGAUUGUAGGCCUCcgcaaggcuucaugacucacucaacugcug
((.((......)).))((((((((((((((.((.(((.((((((((((.((((((.((.(((((.....(((((.(((((.....)))))..)))))...)))))..)))))))).))))))))))))).)).))))))).)))))))..............
((.((......)).))((((((((((((((.((.(((.((((((((((.((((((.((.(((((.....(((((.(((((.....)))))..)))))...)))))..)))))))).))))))))))))).)).))))))).)))))))..............
Structure
ggacgagaucgcggcc - c C C G c -u uguuu -c c
gucauga guuuugu ga GCC UGCAAUUCAA CAGACU ga uacaa gccgc gacgu a
||||||| ||||||| || ||| |||||||||| |||||| || ||||| ||||| ||||| c
caguacu cggaacg CU CGG AUGUUAGGUU GUCUga cu auguu uggug cugua g
--gucgucaacucacu u c C - G - uc --uau ca c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr01: 15203931-15204092 [-]
Database links
Mature ppt-miR1024a-5p
| Accession | MIMAT0053723 |
| Description | Physcomitrella patens ppt-miR1024a-5p mature miRNA |
| Sequence | 34 - CGCCCUGCAAUUCAAGCAGACU - 55 |
| Evidence |
experimental
unknown |
Mature ppt-miR1024a-3p
| Accession | MIMAT0005109 |
| Description | Physcomitrella patens ppt-miR1024a-3p mature miRNA |
| Sequence | 112 - UCUGGUUGGAUUGUAGGCCUC - 132 |
| Evidence |
experimental
454 [1] |
References
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