Accession
MI0005969
Description
Physcomitrella patens
ppt-MIR1027a precursor miRNA
Sequence
60656
reads,
2607.0
reads per million, 10 experiments
gugcaagagcagauacuuaagucgaagagcaucUUUCUAUCUUCUCUUCCAAUCUauugaucugcccuuccaauacuaucagaucaauagaUUGGAAGAGCAGAUCGAAAAAUgcucucaccuuaaggagagacagcgacuc
.(((....)))....((((((..((.((((((.((((.((((.(((((((((((((((((((((...............))))))))))))))))))))).)))).)))).))))))))..))))))...............
.(((....)))....((((((..((.((((((.((((.((((.(((((((((((((((((((((...............))))))))))))))))))))).)))).)))).))))))))..))))))...............
Structure
gugcaagagcagaua uc a c U U cccuuc
cuuaag ga gagcau UUUC AUCU CUCUUCCAAUCUauugaucug c
|||||| || |||||| |||| |||| ||||||||||||||||||||| a
gaauuc cu cucgUA AAAG UAGA GAGAAGGUUagauaacuagac a
cucagcgacagagag ca - A C C uaucau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr20: 8111018-8111159 [+]
Database links
Mature ppt-miR1027a-5p
| Accession | MIMAT0005114 |
| Description | Physcomitrella patens ppt-miR1027a-5p mature miRNA |
| Sequence | 34 - UUUCUAUCUUCUCUUCCAAUCU - 55 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1027a-3p
| Accession | MIMAT0053727 |
| Description | Physcomitrella patens ppt-miR1027a-3p mature miRNA |
| Sequence | 92 - UUGGAAGAGCAGAUCGAAAAAU - 113 |
| Evidence |
experimental
unknown |
References
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