Stem-loop ppt-MIR1029

Accession

MI0005974

Description

Physcomitrella patens ppt-MIR1029 precursor miRNA

Sequence

gcacacaaugugcacacguuacaucacuaucaguauuuuugguuugagagaaaggaggacaggaggcuacgagauuuguuuguguuugauucuugggcgaacuccUCUCUCUCAACCAACCAUACugauacuaauugacguucgaaguuugugcuu
(((((.(((......((((((......(((((((((..((((((.((((((.(((((..(.....(((.(((((.(((........))).)))))))))..))))).))))))))))))..))))))))).....)))))).....))))))))..

Structure

--     c   gugcac      caucac         uu      u      a     ga aggag   a     u   uuu 
  gcaca aau      acguua      uaucaguau  uugguu gagaga aggag  c     gcu cgaga uug   g
  ||||| |||      ||||||      |||||||||  |||||| |||||| |||||  |     ||| ||||| |||    
  cgugu uug      ugcagu      auaguCAUA  AACCAA CUCUCU Uccuc  g     cgg guucu agu   u
uu     -   -aagcu      -uaauc         CC      -      C     aa -----   -     u   uug 

Annotation confidence Not enough data

Genome context

Chr10: 11607194-11607349 [-]

Mature ppt-miR1029

• Accession: MIMAT0005122
• Description: Physcomitrella patens ppt-miR1029 mature miRNA
• Sequence: 106 - UCUCUCUCAACCAACCAUAC - 125
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769