Accession
MI0005974
Description
Physcomitrella patens
ppt-MIR1029 precursor miRNA
Sequence
2607
reads,
110.0
reads per million, 10 experiments
gcacacaaugugcacacguuacaucacuaucagUAUUUUUGGUUUGAGAGAAAGGaggacaggaggcuacgagauuuguuuguguuugauucuugggcgaacuccUCUCUCUCAACCAACCAUACugauacuaauugacguucgaaguuugugcuu
(((((.(((......((((((......(((((((((..((((((.((((((.(((((..(.....(((.(((((.(((........))).)))))))))..))))).))))))))))))..))))))))).....)))))).....))))))))..
(((((.(((......((((((......(((((((((..((((((.((((((.(((((..(.....(((.(((((.(((........))).)))))))))..))))).))))))))))))..))))))))).....)))))).....))))))))..
Structure
-- c gugcac caucac UU U A ga aggag a u uuu gcaca aau acguua uaucagUAU UUGGUU GAGAGA AGGag c gcu cgaga uug g ||||| ||| |||||| ||||||||| |||||| |||||| ||||| | ||| ||||| ||| cgugu uug ugcagu auaguCAUA AACCAA CUCUCU Uccuc g cgg guucu agu u uu - -aagcu -uaauc CC - C aa ----- - u uug
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr10: 11607194-11607349 [-]
Database links
Mature ppt-miR1029-5p
| Accession | MIMAT0053729 |
| Description | Physcomitrella patens ppt-miR1029-5p mature miRNA |
| Sequence | 34 - UAUUUUUGGUUUGAGAGAAAGG - 55 |
| Evidence |
experimental
unknown |
Mature ppt-miR1029-3p
| Accession | MIMAT0005122 |
| Description | Physcomitrella patens ppt-miR1029-3p mature miRNA |
| Sequence | 106 - UCUCUCUCAACCAACCAUAC - 125 |
| Evidence |
experimental
454 [1] |
References
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