Accession
MI0005976
Description
Physcomitrella patens
ppt-MIR1030b precursor miRNA
Sequence
2421
reads,
108.0
reads per million, 10 experiments
ugucaugcaUCUGCAUCUGCACCUGCACCAcaaugugaucgcggcgaucucuguuccggagguucagcccgguaguuuuacaugcggcccugcauucagcgcuggcaucuuccguggacaaguuucguagcucacauuccgaugGUGCAGUGCUUAUGCAGAAgcguugc
.((.((((.(((((((..((((.(((((((((((((((..((.((((.((.(((((((((((....(((.(((.(((....(((((....)))))..)))))))))..)))))).)))))))..)))).)))))))))..).)))))))))))..))))))).)))).))
.((.((((.(((((((..((((.(((((((((((((((..((.((((.((.(((((((((((....(((.(((.(((....(((((....)))))..)))))))))..)))))).)))))))..)))).)))))))))..).)))))))))))..))))))).)))).))
Structure
u c a CU C - -- uc g -u c - uuca c a uuac g gu augc UCUGCAU GCAC UGCACCA c aauguga gc gcga cu uguuc cggagg gcc ggu guu augcg c || |||| ||||||| |||| ||||||| | ||||||| || |||| || ||||| |||||| ||| ||| ||| ||||| cg ugcg AGACGUA CGUG ACGUGgu g uuacacu cg ugcu ga acagg gccuuc cgg ucg cga uacgu c - u A UU - a cc -- a uu - u --ua - - --cu c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr26: 4349044-4349213 [-]
Database links
Mature ppt-miR1030b-5p
| Accession | MIMAT0005124 |
| Description | Physcomitrella patens ppt-miR1030b-5p mature miRNA |
| Sequence | 10 - UCUGCAUCUGCACCUGCACCA - 30 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1030b-3p
| Accession | MIMAT0053731 |
| Description | Physcomitrella patens ppt-miR1030b-3p mature miRNA |
| Sequence | 145 - GUGCAGUGCUUAUGCAGAA - 163 |
| Evidence |
experimental
unknown |
References
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