Accession
MI0005977
Description
Physcomitrella patens
ppt-MIR1030c precursor miRNA
Sequence
uacuccuugcucugcugcaucguaaugcaUCUGCAUCUGCACCUGCACCAcguugugauaggaacaaaacucugucuugcugauucccugcacacaugccuuuguuacccagcauucucgaauacggcgucggugcuauccucagauaaguagaguuguccucacuagguuggugaggugcauaugcagaggcguuacauugcagcugcuuaauauug
........((...((((((..(((((((.(((((((.(((((((.((((((.(.((((..(((.((..((((((.((((((((......((((..(((((((((..............))))...)))))..)))).....)))).))))))))))))))))))).).).)))))))))))).))))))).)))))))..)))))).)).........
........((...((((((..(((((((.(((((((.(((((((.((((((.(.((((..(((.((..((((((.((((((((......((((..(((((((((..............))))...)))))..)))).....)))).))))))))))))))))))).).).)))))))))))).))))))).)))))))..)))))).)).........
Structure
-uacuccuu ucu uc a C G - g u ua a aa u - uucccu ac --- uuaccc
gc gcugca guaaugc UCUGCAU UGCACCU CACCA c u guga gga ca acucug cuug cuga gcac augcc uuug a
|| |||||| ||||||| ||||||| ||||||| ||||| | | |||| ||| || |||||| |||| |||| |||| ||||| ||||
cg cgacgu cauugcg agacgua acgugga guggu g a cacu ccu gu ugagau gaau gacu cgug ugcgg aagc g
guuauaauu --u ua g u - u g u -- - -- - a -ccuau gc cau ucuuac
Annotation confidence
Not enough data
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Genome context
Chr13: 13778771-13778988 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1030c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1030c
| Accession | MIMAT0005125 |
| Description | Physcomitrella patens ppt-miR1030c mature miRNA |
| Sequence | 30 - UCUGCAUCUGCACCUGCACCA - 50 |
| Evidence |
experimental
454 [1] |
References
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