Accession
MI0005984
Description
Physcomitrella patens
ppt-MIR1030j precursor miRNA
Sequence
agccuccucuucagcgcuguaaugccauguuCCUGCAUCUGCACCUGCACCAcacuucuacgagagaaugugcagaagucagagcgguguugugcgaauccugcucucagucaauugcugggauugcguuucuccaaucuucuuucucugggcuuuucucuggcauuguggugguguaggugcuuaugcagaaauauugccuugcagcuugcaguuacuagu
........((.(((.(((((((.((.(((((.((((((..(((((((((((((((..(((.(((((((.((.((((....(((((((.(((.....))).)))))))((((.....))))((((((.(.....)))))))......)))).))))))))))))....)).)))))))))))))..)))))).))))).)).)))))))))).))........
........((.(((.(((((((.((.(((((.((((((..(((((((((((((((..(((.(((((((.((.((((....(((((((.(((.....))).)))))))((((.....))))((((((.(.....)))))))......)))).))))))))))))....)).)))))))))))))..)))))).))))).)).)))))))))).))........
Structure
agccuccu u c u c C CU - --uu c u g -----------------------------------aguc u g
cu cag gcuguaa gc auguu CUGCAU GCACCUGCACCAc ac cua gagagaa gu caga agagcgg guu u
|| ||| ||||||| || ||||| |||||| ||||||||||||| || ||| ||||||| || |||| ||||||| ||| g
ga guu cgacguu cg uauaa gacgua cguggauguggug ug ggu cucuuuu cg gucu ucucguc uaa c
ugaucauu c - c u a uu g uuac - - g cuuucuucuaaccucuuugcguuagggucguuaacugac c g
Annotation confidence
Not enough data
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Genome context
Chr10: 1726020-1726241 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1030j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1030j
| Accession | MIMAT0005132 |
| Description | Physcomitrella patens ppt-miR1030j mature miRNA |
| Sequence | 32 - CCUGCAUCUGCACCUGCACCA - 52 |
| Evidence |
experimental
454 [1] |
References
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