Accession
MI0005986
Description
Physcomitrella patens
ppt-MIR1031b precursor miRNA
Sequence
2368
reads,
97.0
reads per million, 10 experiments
acggcggaaguucuggaucacaaauuugcUCAAUGCUCUCUGGAGCUUCUgugccguugcuuuggggaguguggguuugucccccuggacaggucugcagaaccugacggccuuggcccugaucugcaucccucucuuaauugaaccucagAAGCUUCAUAGGACAUUGACUUgauuugugacccugugaugaagaaa
...((((.......((.(((((((((...((((((.(((.(((((((((((.((((..((((((((...(((((((((((((....)))))))))))))...))))).)))..)))).................((......))....))))))))))).))).))))))...)))))))))))))))..........
...((((.......((.(((((((((...((((((.(((.(((((((((((.((((..((((((((...(((((((((((((....)))))))))))))...))))).)))..)))).................((......))....))))))))))).))).))))))...)))))))))))))))..........
Structure
-------acg aaguucu a ugc C C ------------------------------u uu - gag c
gcgg gg ucacaaauu UCAAUG UCU UGGAGCUUCUg gccg gcu uuggg uguggguuugucc c
|||| || ||||||||| |||||| ||| ||||||||||| |||| ||| ||||| |||||||||||||
uguc cc aguguuuag AGUUAC GGA ACUUCGAAgac cggu cgg agucc acgucuggacagg c
aaagaaguag ------- - UUC A U uccaaguuaauucucucccuacgucuagucc uc c aag u
Annotation confidence
High
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Genome context
Chr14: 5256324-5256521 [+]
Database links
Mature ppt-miR1031b-5p
| Accession | MIMAT0005134 |
| Description | Physcomitrella patens ppt-miR1031b-5p mature miRNA |
| Sequence | 30 - UCAAUGCUCUCUGGAGCUUCU - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1031b-3p
| Accession | MIMAT0053741 |
| Description | Physcomitrella patens ppt-miR1031b-3p mature miRNA |
| Sequence | 152 - AAGCUUCAUAGGACAUUGACUU - 173 |
| Evidence |
experimental
unknown |
References
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