Accession
MI0005987
Description
Physcomitrella patens
ppt-MIR1032 precursor miRNA
Sequence
78732
reads,
3217.0
reads per million, 10 experiments
acuagcaagagccaugccucugcccaggcAGGUGACUGCCUGGAAUUGGGcauaaaugcccaauuggacucccaagugccCAAUUCCAGGCAAGCCCCUGUcugggcaggagcaugauuucuuccag
....(.(((((.(((((.((((((((((((((.(..(((((((((((((((((..........((((....)))))))))))))))))))))..).)))))))))))))).)))))..))))).)..
....(.(((((.(((((.((((((((((((((.(..(((((((((((((((((..........((((....)))))))))))))))))))))..).)))))))))))))).)))))..))))).)..
Structure
acua c -c c U AC aaaugcccaa a
g aagag caugc ucugcccaggcAGG G UGCCUGGAAUUGGGcau uugg c
| ||||| ||||| |||||||||||||| | ||||||||||||||||| ||||
c uucuu guacg ggacgggucUGUCC C ACGGACCUUAACccgug aacc u
--ga c ua a C GA ---------- c
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr19: 443502-443628 [-]
Database links
Mature ppt-miR1032-5p
| Accession | MIMAT0005135 |
| Description | Physcomitrella patens ppt-miR1032-5p mature miRNA |
| Sequence | 30 - AGGUGACUGCCUGGAAUUGGG - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1032-3p
| Accession | MIMAT0053742 |
| Description | Physcomitrella patens ppt-miR1032-3p mature miRNA |
| Sequence | 81 - CAAUUCCAGGCAAGCCCCUGU - 101 |
| Evidence |
experimental
unknown |
References
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