Stem-loop ppt-MIR1033a

Accession

MI0005988

Description

Physcomitrella patens ppt-MIR1033a precursor miRNA

Sequence

ugaucagauacaauccggcgguggcauugggaauguccaucacaaccugccaacauuccagguuauguUGACGGGUCGUGAUGGGCACUcucagcgucucaugucacaaaaacgcagac
................(((((.(((.((((((.((((((((((.(((((.((((((........)))))).))))).)))))))))).)))))).))).).))))..............

Structure

ugaucagauacaaucc    - u   a      a          a     c      ucc 
                ggcg g ggc uuggga uguccaucac accug caacau   a
                |||| | ||| |||||| |||||||||| ||||| ||||||    
                cugu c cug gacucU ACGGGUAGUG UGGGC GUugua   g
--cagacgcaaaaaca    a u   c      C          C     A      uug 

Annotation confidence Not enough data

Genome context

Chr04: 11869169-11869287 [+]

Mature ppt-miR1033a

• Accession: MIMAT0005136
• Description: Physcomitrella patens ppt-miR1033a mature miRNA
• Sequence: 69 - UGACGGGUCGUGAUGGGCACU - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769