Accession
MI0005992
Description
Physcomitrella patens
ppt-MIR1033e precursor miRNA
Sequence
276572
reads,
11760.0
reads per million, 10 experiments
gacuaagauaacauucggcagggguguugggaAUGUCCAGCACAACCUGUCAACauuccagguuauguUGACGGGUCGUGAUGGGCACUcucagcgucccaugcccaaacugcacauca
................((((((((((((((((.((((((.(((.((((((((((((........)))))))))))).))).)))))).)))))))))))).))))..............
................((((((((((((((((.((((((.(((.((((((((((((........)))))))))))).))).)))))).)))))))))))).))))..............
Structure
gacuaagauaacauuc - A G A ucc
ggca gggguguuggga UGUCCA CAC ACCUGUCAACau a
|||| |||||||||||| |||||| ||| ||||||||||||
ccgu cccugcgacucU ACGGGU GUG UGGGCAGUugua g
--acuacacgucaaac a C A C uug
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr26: 3570240-3570358 [+]
Database links
Mature ppt-miR1033e-5p
| Accession | MIMAT0061201 |
| Description | Physcomitrella patens ppt-miR1033e-5p mature miRNA |
| Sequence | 33 - AUGUCCAGCACAACCUGUCAAC - 54 |
| Evidence |
experimental
Illumina [1] |
Mature ppt-miR1033e-3p
| Accession | MIMAT0005140 |
| Description | Physcomitrella patens ppt-miR1033e-3p mature miRNA |
| Sequence | 69 - UGACGGGUCGUGAUGGGCACU - 89 |
| Evidence |
experimental
454 [1] |
References
|
