Accession
MI0005994
Description
Physcomitrella patens
ppt-MIR1035 precursor miRNA
Sequence
5270
reads,
229.0
reads per million, 10 experiments
gggucugaaagcgaagaaguuuuucaaacCGUCUUAGCCCACAAAACGAAuuguugugauuguuugagaucguguauucauauggcagccuugcaagcugucacagaucucucugucacgauuCGUUUUGUGAGCUAAGAAGGUUugaagaagaguauucuccauguugu
...(((........)))..(((((((((((.(((((((.((((((((((...((((((((.....((((((.(((........((((((.......)))))))))))))))...)))))))))))))))))).))))))).)))))))))))(((....)))........
...(((........)))..(((((((((((.(((((((.((((((((((...((((((((.....((((((.(((........((((((.......)))))))))))))))...)))))))))))))))))).))))))).)))))))))))(((....)))........
Structure
gggucugaaagcgaagaag G C Auu uguuu g auucauau cu
uuuuucaaacC UCUUAGC CACAAAACGA guugugau gagauc ugu ggcagc u
||||||||||| ||||||| |||||||||| |||||||| |||||| ||| |||||| g
aagaaguUUGG AGAAUCG GUGUUUUGCu uagcacug cucuag aca cugucg c
-uguuguaccucuuaugag A A --- --ucu - -------- aa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr26: 4641843-4642012 [-]
Database links
Mature ppt-miR1035-5p
| Accession | MIMAT0005142 |
| Description | Physcomitrella patens ppt-miR1035-5p mature miRNA |
| Sequence | 30 - CGUCUUAGCCCACAAAACGAA - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1035-3p
| Accession | MIMAT0053748 |
| Description | Physcomitrella patens ppt-miR1035-3p mature miRNA |
| Sequence | 124 - CGUUUUGUGAGCUAAGAAGGUU - 145 |
| Evidence |
experimental
unknown |
References
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