Accession
MI0005995
Description
Physcomitrella patens
ppt-MIR1036 precursor miRNA
Sequence
831
reads,
37.0
reads per million, 10 experiments
acuguauguggcuugaacgccaauaucaguGUGGAGUCCGUAAUUAGCUGCgaaauucaauggcauuguggugguugcaagggcgaauuacaccaacgugugcacgcagcuuccuuuguugaauuUCGCAGCUAAUUAAGGAUUCUacacagcuuggcguuuguauuguuauacagu
((((((((.....((((((((((...(.(((((((((((.(((((((((((((((((((...(((....((.((((((....((.....((((....))))))..)))))).))..)))))))))))))))))))))).))))))))))).).))))))))))......))))))))
((((((((.....((((((((((...(.(((((((((((.(((((((((((((((((((...(((....((.((((((....((.....((((....))))))..)))))).))..)))))))))))))))))))))).))))))))))).).))))))))))......))))))))
Structure
-uggcu uau a G aug uugu u aagg gaauu c
acuguaug ugaacgccaa c guGUGGAGUCC UAAUUAGCUGCgaaauuca gca gg gguugc gc acac a
|||||||| |||||||||| | ||||||||||| ||||||||||||||||||| ||| || |||||| || ||||
ugacauau guuugcgguu g cacaUCUUAGG AUUAAUCGACGCUuuaagu ugu cc ucgacg cg ugug a
uguuau --c a A --- --uu u --ca ----- c
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr20: 8674291-8674467 [+]
Database links
Mature ppt-miR1036-5p
| Accession | MIMAT0005143 |
| Description | Physcomitrella patens ppt-miR1036-5p mature miRNA |
| Sequence | 31 - GUGGAGUCCGUAAUUAGCUGC - 51 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1036-3p
| Accession | MIMAT0005144 |
| Description | Physcomitrella patens ppt-miR1036-3p mature miRNA |
| Sequence | 126 - UCGCAGCUAAUUAAGGAUUCU - 146 |
| Evidence |
experimental
454 [1] |
References
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