Accession
MI0006000
Description
Physcomitrella patens
ppt-MIR1041 precursor miRNA
Sequence
2086
reads,
77.0
reads per million, 10 experiments
uggacaagucauuuaucuuuaaguguacuUUUUCGGGUGAGAGUGGUCCUgagaaugauugaccaggaaacauaacuuccucaaaaucauuucaAAACCACCAUCACCUGAAAAAcuacaaacuaagauaaacucuguaaua
...((((((...(((((((....((((.((((((((((((..(((((..(((((.(((((....(((((.......)))))...))))))))))..)))))..)))))))))))).))))....)))))))))).)))....
...((((((...(((((((....((((.((((((((((((..(((((..(((((.(((((....(((((.......)))))...))))))))))..)))))..)))))))))))).))))....)))))))))).)))....
Structure
-ugg - cau uaag c GA CC a gacc ac
aca agu uuaucuu ugua uUUUUCGGGUGA GUGGU Ugaga ugauu aggaa a
||| ||| ||||||| |||| |||||||||||| ||||| ||||| ||||| ||||| u
ugu uca aauagaa acau AAAAAGUCCACU CACCA acuuu acuaa uccuu a
auaa c --- ucaa c AC AA - -aac ca
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr08: 3290147-3290288 [+]
Database links
Mature ppt-miR1041-5p
| Accession | MIMAT0005151 |
| Description | Physcomitrella patens ppt-miR1041-5p mature miRNA |
| Sequence | 30 - UUUUCGGGUGAGAGUGGUCCU - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1041-3p
| Accession | MIMAT0053751 |
| Description | Physcomitrella patens ppt-miR1041-3p mature miRNA |
| Sequence | 95 - AAACCACCAUCACCUGAAAAA - 115 |
| Evidence |
experimental
unknown |
References
|
