Accession
MI0006005
Description
Physcomitrella patens
ppt-MIR1046 precursor miRNA
Sequence
2859
reads,
126.0
reads per million, 10 experiments
ucuauaucuugaugcucaaaauucagacgUGGAUUUCAUAUUUUUCACGUCaagaaucucacagguacaauuaagucaugagauucuuguggUGAAAAAUAUGAAAAAUCCACGUCugaauuuugaaagcgcuugcccuc
.............(((((((((((((((((((((((((((((((((((..(((((((((((...(.((......))).)))))))))))..)))))))))))))..))))))))))))))))))))..))..........
.............(((((((((((((((((((((((((((((((((((..(((((((((((...(.((......))).)))))))))))..)))))))))))))..))))))))))))))))))))..))..........
Structure
ucuauaucuugau -- -- GU cag u aa
gc ucaaaauucagacgUGGAUU UCAUAUUUUUCAC Caagaaucuca g ac u
|| |||||||||||||||||||| ||||||||||||| ||||||||||| | ||
cg aguuuuaaguCUGCACCUAA AGUAUAAAAAGUg guucuuagagu c ug u
---cucccguucg aa AA gu --a - aa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr19: 8168449-8168588 [+]
Database links
Mature ppt-miR1046-5p
| Accession | MIMAT0005159 |
| Description | Physcomitrella patens ppt-miR1046-5p mature miRNA |
| Sequence | 30 - UGGAUUUCAUAUUUUUCACGUC - 51 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1046-3p
| Accession | MIMAT0005160 |
| Description | Physcomitrella patens ppt-miR1046-3p mature miRNA |
| Sequence | 93 - UGAAAAAUAUGAAAAAUCCACGUC - 116 |
| Evidence |
experimental
454 [1] |
References
|
