Accession
MI0006014
Description
Physcomitrella patens
ppt-MIR1055 precursor miRNA
Sequence
217
reads,
8.0
reads per million, 10 experiments
uccucucgguugccuuagagcauccgcagccagCCACUGGAAACACCCCUGAAUcacuauaccauacuauuauugauaucaagguguaacaaauauugugauUUAGGGGUGUUUUCCAGUGACUugcuguagaugcucuuacaucuguugucua
......(((.((....((((((((.(((((.((.(((((((((((((((((((((((((((((....((((...))))....)))))).........)))))))))))))).))))))))).)).))))).))))))))..)).))).......
......(((.((....((((((((.(((((.((.(((((((((((((((((((((((((((((....((((...))))....)))))).........)))))))))))))).))))))))).)).))))).))))))))..)).))).......
Structure
-uccucu u ccuu c c C - --------- auac a
cgg ug agagcauc gcagc ag CACUGGAAA CACCCCUGAAUcac uauacc uauu
||| || |||||||| ||||| || ||||||||| |||||||||||||| |||||| |||| u
guc ac ucucguag ugucg UC GUGACCUUU GUGGGGAUUuagug augugg auag
aucuguu u --au a u A U uuauaaaca aacu u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr12: 7457064-7457217 [+]
Database links
Mature ppt-miR1055-5p
| Accession | MIMAT0053757 |
| Description | Physcomitrella patens ppt-miR1055-5p mature miRNA |
| Sequence | 34 - CCACUGGAAACACCCCUGAAU - 54 |
| Evidence |
experimental
unknown |
Mature ppt-miR1055-3p
| Accession | MIMAT0005173 |
| Description | Physcomitrella patens ppt-miR1055-3p mature miRNA |
| Sequence | 103 - UUAGGGGUGUUUUCCAGUGACU - 124 |
| Evidence |
experimental
454 [1] |
References
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