Accession
MI0006016
Description
Physcomitrella patens
ppt-MIR1057 precursor miRNA
Sequence
196
reads,
9.0
reads per million, 10 experiments
cguugagucucacguuauguggagauuaucaaccCCCAGCUAGAACAGAAGAAUauguauacuaUUCUUGUGUUCUAGCUGGGGGUugauaaugcaaacuagacaagauuucagua
..((((((((...(((..((....(((((((((((((((((((((((.(((((((.......))))))).)))))))))))))))))))))))....))..))).))).)))))..
..((((((((...(((..((....(((((((((((((((((((((((.(((((((.......))))))).)))))))))))))))))))))))....))..))).))).)))))..
Structure
cg - cac au ggag G ug uugag ucu guu gu auuaucaaccCCCAGCUAGAACA AAGAAUa u ||||| ||| ||| || ||||||||||||||||||||||| ||||||| a gacuu aga cag ca uaauaguUGGGGGUCGAUCUUGU UUCUUau u au u --a au aacg G ca
Annotation confidence
Medium
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Genome context
Chr02: 19544887-19545002 [+]
Database links
Mature ppt-miR1057-5p
| Accession | MIMAT0053759 |
| Description | Physcomitrella patens ppt-miR1057-5p mature miRNA |
| Sequence | 35 - CCCAGCUAGAACAGAAGAAU - 54 |
| Evidence |
experimental
unknown |
Mature ppt-miR1057-3p
| Accession | MIMAT0005175 |
| Description | Physcomitrella patens ppt-miR1057-3p mature miRNA |
| Sequence | 65 - UUCUUGUGUUCUAGCUGGGGGU - 86 |
| Evidence |
experimental
454 [1] |
References
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