Accession
MI0006017
Description
Physcomitrella patens
ppt-MIR1058 precursor miRNA
Sequence
1367
reads,
60.0
reads per million, 10 experiments
ugugagcagugucuuaucaugacaguuugcaguGCUCUGUGAUGGAAUCUCUAGcggucuuguauacagcucggccacauacaagaccgcuAGAGAUUCCAUCACGAAGCACugcaaacugccgcgaaguacgcuucaugua
.((((..(((((((..((.((.((((((((((((((.((((((((((((((((((((((((((((...((...))...)))))))))))))))))))))))))))).)))))))))))))).)).)))).)))))))))...
.((((..(((((((..((.((.((((((((((((((.((((((((((((((((((((((((((((...((...))...)))))))))))))))))))))))))))).)))))))))))))).)).)))).)))))))))...
Structure
--u gc - ua a a C aca u guga agugu cu uc ug caguuugcaguGCU UGUGAUGGAAUCUCUAGcggucuuguau gc |||| ||||| || || || |||||||||||||| |||||||||||||||||||||||||||| || c uacu ucgca ga ag gc gucaaacguCACGA GCACUACCUUAGAGAucgccagaacaua cg aug -- u -- c c A cac g
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr22: 9164397-9164538 [-]
Database links
Mature ppt-miR1058-5p
| Accession | MIMAT0053760 |
| Description | Physcomitrella patens ppt-miR1058-5p mature miRNA |
| Sequence | 34 - GCUCUGUGAUGGAAUCUCUAG - 54 |
| Evidence |
experimental
unknown |
Mature ppt-miR1058-3p
| Accession | MIMAT0005176 |
| Description | Physcomitrella patens ppt-miR1058-3p mature miRNA |
| Sequence | 92 - AGAGAUUCCAUCACGAAGCAC - 112 |
| Evidence |
experimental
454 [1] |
References
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