Accession
MI0006024
Description
Physcomitrella patens
ppt-MIR1063c precursor miRNA
Sequence
accaagaauuuugccguguugcccacuuuCAUCUUGGAGUACUGCAUCUUcacaaccgucgcuuuuucaaaucugaauuccagucacugaagcucgggcuagauuuaagggcucuggggacgcaggaaggugaguucagugguacaaauaaaagaauuagugauaauuuucuggagcuuaguagucggauggcagagggaaaacaaaauuaguauacuugacuugcguuuuaaguguagauccaaauagauuuucaaaagaauagguccuguugucccucgaauugaagcucguuuuggaaucuuacggagacgaagaugcauuccuccaagaagugaguggguaacaggcuacaucaaacgg
............(((.((((((((((((.(.((((((((...(((((((((....((((.....(((((((.(((((((((..((.(((...((((((((.........))).)))))....)))))..).)))))))).............(((((((....)))))))...((((((....(((....))).((((((.((((.......(((((((((........)))))))))((((......))))(((....))).......)))).))))))......))))))..)))))))....))))....)))))))))...)))))))).).)))))))))))))))............
............(((.((((((((((((.(.((((((((...(((((((((....((((.....(((((((.(((((((((..((.(((...((((((((.........))).)))))....)))))..).)))))))).............(((((((....)))))))...((((((....(((....))).((((((.((((.......(((((((((........)))))))))((((......))))(((....))).......)))).))))))......))))))..)))))))....))))....)))))))))...)))))))).).)))))))))))))))............
Structure
accaagaauuuu g u A UAC acaa cgcuu ----------------------------------------------------------------------------------------------------------------------------------------------------------u - ag a -aag - aga
gcc uguugcccacuu C UCUUGGAG UGCAUCUUc ccgu uuucaaa cugaauuc c uc cug cucgg gcu u
||| |||||||||||| | |||||||| ||||||||| |||| ||||||| |||||||| | || ||| ||||| ||| u
cgg acaaugggugag g agaaccuc acguagaag ggca aagguuu gacuugag g ag gac ggguc cgg u
ggcaaacuacau - u a cuu caga -uucu ugcucgaaguuaagcucccuguuguccuggauaagaaaacuuuuagauaaaccuagaugugaauuuugcguucaguucauaugauuaaaacaaaagggagacgguaggcugaugauucgaggucuuuuaauagugauuaagaaaauaaacauggu u ga - gcag u gaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr21: 5128188-5128550 [-]
Database links
Mature ppt-miR1063c
| Accession | MIMAT0005184 |
| Description | Physcomitrella patens ppt-miR1063c mature miRNA |
| Sequence | 30 - CAUCUUGGAGUACUGCAUCUU - 50 |
| Evidence |
experimental
454 [1] |
References
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