Accession
MI0006031
Description
Physcomitrella patens
ppt-MIR1065 precursor miRNA
Sequence
169263
reads,
7076.0
reads per million, 10 experiments
gauccauuguacugauuccgaaggagaagACAGUCUCUGACUUCUCGCAGagugagccuguuucugcaguacuggaacgauugguugagaccacuggcacuaggcaaaaaccuuguuucuggugacuuggucugggaucguacagagcugcagaacgcuugacauGCGGGAAAUCAGAGACAGUCGcuuccuuugguuucuaauugucacca
.............((..(((((((((..(((.((((((((.((((((((...(((((..(((.(((((((.(((..((((((.....((((((..((((((((((((.....))))..)))))).))))))))..)))))).))).)))))))))))))))...)))))))).)))))))).)))..)))))))))..))............
.............((..(((((((((..(((.((((((((.((((((((...(((((..(((.(((((((.(((..((((((.....((((((..((((((((((((.....))))..)))))).))))))))..)))))).))).)))))))))))))))...)))))))).)))))))).)))..)))))))))..))............
Structure
gauccauuguacu uu aa A C Gag cu u a ga gguug cu - -- a
ga ccgaaggag gAC GUCUCUGA UUCUCGCA ugagc guu cugcagu cug acgauu agacca gg cacuag gcaa a
|| ||||||||| ||| |||||||| |||||||| ||||| ||| ||||||| ||| |||||| |||||| || |||||| |||| a
cu gguuuccuu CUG CAGAGACU AAGGGCGu guucg caa gacgucg gac ugcuag ucuggu uc gugguc uguu c
-accacuguuaau uu cG A A aca -- - a -a ---gg -- a uu c
Annotation confidence
High
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Genome context
Chr07: 9473974-9474185 [+]
Database links
Mature ppt-miR1065-5p
| Accession | MIMAT0005192 |
| Description | Physcomitrella patens ppt-miR1065-5p mature miRNA |
| Sequence | 30 - ACAGUCUCUGACUUCUCGCAG - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1065-3p
| Accession | MIMAT0053768 |
| Description | Physcomitrella patens ppt-miR1065-3p mature miRNA |
| Sequence | 166 - GCGGGAAAUCAGAGACAGUCG - 186 |
| Evidence |
experimental
unknown |
References
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