Accession
MI0006033
Description
Physcomitrella patens
ppt-MIR1067 precursor miRNA
Sequence
581
reads,
25.0
reads per million, 10 experiments
agacuuguuguuugcgguuaauuaauugcACAUACUGAAGUUUGAUGCCAuguucugaugaauccggucuugauuccugaaggaaagaaacaugaaauugccgcuguggcaucucuacaugGCAUCAAACGUCAGCAUGUGUaaauaguuaauugcacgacaccagaa
....(((.((((((((((((((((.((((((((.((((.((((((((((((((...((((....((((.((..((((....))))..))..........))))......))))...)))))))))))))).)))).)))))))).)))))))))))).)))).)))..
....(((.((((((((((((((((.((((((((.((((.((((((((((((((...((((....((((.((..((((....))))..))..........))))......))))...)))))))))))))).)))).)))))))).)))))))))))).)))).)))..
Structure
agac u - a A A ucu --aauc ---------c ga u
uug uguu ugcgguuaauua uugcACAU CUGA GUUUGAUGCCAugu gaug cggu uu uucc g
||| |||| |||||||||||| |||||||| |||| |||||||||||||| |||| |||| || ||||
gac acag acguuaauugau aaUGUGUA GACU CAAACUACGguaca cuac gccg aa aagg a
--aa c c a C G ucu gguguc uuaaaguaca ga a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr09: 4199299-4199466 [-]
Database links
Mature ppt-miR1067-5p
| Accession | MIMAT0005194 |
| Description | Physcomitrella patens ppt-miR1067-5p mature miRNA |
| Sequence | 30 - ACAUACUGAAGUUUGAUGCCA - 50 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1067-3p
| Accession | MIMAT0053770 |
| Description | Physcomitrella patens ppt-miR1067-3p mature miRNA |
| Sequence | 122 - GCAUCAAACGUCAGCAUGUGU - 142 |
| Evidence |
experimental
unknown |
References
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