Accession
MI0006034
Description
Physcomitrella patens
ppt-MIR1068 precursor miRNA
Sequence
592
reads,
25.0
reads per million, 10 experiments
cuuuucaacaccuuggcgcuggccuucgUAGCCAUUUGCUUGAAGGUCAacucagacggguggaagaggcaauguauugacgucuuccuccauuuuccgaccauucucuaggcaccacagaggcaucaaugcucugccuguuucugccguguggguugguccucAAGCAACGGGCUACGAGGACCaaugucaauaagcaucaac
............((((((.(((.((((((((((..((((((((.((((((((((.((((..((((.(((((..(((((((.(((((..........((............)).......))))).)))))))..))))).))))..)))).)))))))).))))))))))..)))))))))).))).))))))...........
............((((((.(((.((((((((((..((((((((.((((((((((.((((..((((.(((((..(((((((.(((((..........((............)).......))))).)))))))..))))).))))..)))).)))))))).))))))))))..)))))))))).))).))))))...........
Structure
cuuuucaacacc c c AU A - g gu g au c ccuccauuuu gacca
uuggcg ugg cuucgUAGCC UUGCUUGA GG UCAacuca acgg ggaa aggca guauuga gucuu cc u
|||||| ||| |||||||||| |||||||| || |||||||| |||| |||| ||||| ||||||| ||||| ||
aacugu aCC GGAGCAUCGG AACGAAcu cc gguugggu ugcc cuuu uccgu cguaacu cggag gg u
-caacuacgaau a A GC - u g gu g cu a ---acaccac aucuc
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr22: 7773863-7774066 [-]
Database links
Mature ppt-miR1068-5p
| Accession | MIMAT0005195 |
| Description | Physcomitrella patens ppt-miR1068-5p mature miRNA |
| Sequence | 29 - UAGCCAUUUGCUUGAAGGUCA - 49 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1068-3p
| Accession | MIMAT0053771 |
| Description | Physcomitrella patens ppt-miR1068-3p mature miRNA |
| Sequence | 165 - AAGCAACGGGCUACGAGGACC - 185 |
| Evidence |
experimental
unknown |
References
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