Stem-loop ppt-MIR1070

Accession

MI0006036

Description

Physcomitrella patens ppt-MIR1070 precursor miRNA

Sequence

uuggaccauuuucucugugcuucguuguaUCGGUUUCUAGUAAAACUUGCugaaaaauucucaacaaguuuuacgagcaaccgauacaacgaagcaaccgacuguauuguag
.............((.(((((((((((((((((((.((.((((((((((.(((.......))).)))))))))).)).))))))))))))))))).)).))...........

Structure

uuggaccauuuuc  u  -                 U  A          C   aa 
             uc gu gcuucguuguaUCGGUU CU GUAAAACUUG uga  a
             || || ||||||||||||||||| || |||||||||| |||  a
             ag ca cgaagcaacauagccaa ga cauuuugaac acu  u
--gauguuauguc  c  a                 c  g          a   cu 

Annotation confidence Not enough data

Genome context

Chr19: 2074405-2074516 [+]

Mature ppt-miR1070

• Accession: MIMAT0005198
• Description: Physcomitrella patens ppt-miR1070 mature miRNA
• Sequence: 30 - UCGGUUUCUAGUAAAACUUGC - 50
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769