Accession
MI0006041
Description
Physcomitrella patens
ppt-MIR1075 precursor miRNA
Sequence
219
reads,
9.0
reads per million, 10 experiments
gguugguugagugaacuugacaucuauauugguAGGAACCAUGCCUGGAACAAGgcaaaacaacuacccaaaguggguauucucuuugccuUGUUUCAGUCAUGGUUUCUACuggugcuugucguugaucacugucuuuauc
.........(((((.(.(((((....(((((((((((((((((.(((((((((((((((.....((((((...)))))).....))))))))))))))).)))))))))))))))))..)))))..).))))).........
.........(((((.(.(((((....(((((((((((((((((.(((((((((((((((.....((((((...)))))).....))))))))))))))).)))))))))))))))))..)))))..).))))).........
Structure
gguugguug a -u ucua C acaac a
aguga c ugaca uauugguAGGAACCAUG CUGGAACAAGgcaaa uaccca
||||| | ||||| ||||||||||||||||| ||||||||||||||| |||||| a
ucacu g gcugu gugguCAUCUUUGGUAC GACUUUGUuccguuu augggu
cuauuucug a uu --uc U cucuu g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr13: 8730372-8730513 [-]
Database links
Mature ppt-miR1075-5p
| Accession | MIMAT0053774 |
| Description | Physcomitrella patens ppt-miR1075-5p mature miRNA |
| Sequence | 34 - AGGAACCAUGCCUGGAACAAG - 54 |
| Evidence |
experimental
unknown |
Mature ppt-miR1075-3p
| Accession | MIMAT0005205 |
| Description | Physcomitrella patens ppt-miR1075-3p mature miRNA |
| Sequence | 92 - UGUUUCAGUCAUGGUUUCUAC - 112 |
| Evidence |
experimental
454 [1] |
References
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