Accession
MI0006042
Description
Physcomitrella patens
ppt-MIR1076 precursor miRNA
Sequence
gcgaaagcuauucaaacgugguguugUAUCACAAGGUGCGAUAAUUGcucgaagacauuggcaguuaagauauuuuagccccaugaaaauguggguuagauguaagaguagaaguguagggauuuguacguaguguuaauguagcugugcauugucaauucugaguuccaaaaucuCCAAGCACUUAUCGCACCCUGcgauacaacauacacaguugcaagauggaa
.......(((((..((((((((((((((((.((.((((((((((.((((.(.(((..((((.(.(((.((...(((((((((((....))).)))))))).......(((.((((......)))).)))....((.(((((((....))))))).))..))))).).))))..))).).)))).)))))))))).)).)))))))))).))).)))....)))))..
.......(((((..((((((((((((((((.((.((((((((((.((((.(.(((..((((.(.(((.((...(((((((((((....))).)))))))).......(((.((((......)))).)))....((.(((((((....))))))).))..))))).).))))..))).).)))).)))))))))).)).)))))))))).))).)))....)))))..
Structure
gcgaaag --ca - - A A U c a ca c g a --------------------------------------------------------uau - g
cuauu aac gug guguugUAUC CA GGUGCGAUAA UGcu g aga uugg a uua ga uuuagccc cau a
||||| ||| ||| |||||||||| || |||||||||| |||| | ||| |||| | ||| || |||||||| |||
gguag uug cac uacaacauag GU CCACGCUAUU ACGA C ucu aacc u agu cu agauuggg gua a
-----aa aacg a a c C C A C aa u g - uaacuguuacgugucgauguaauugugaugcauguuuagggaugugaagaugagaaugu u a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr10: 2060670-2060896 [-]
Database links
Mature ppt-miR1076-5p
| Accession | MIMAT0005206 |
| Description | Physcomitrella patens ppt-miR1076-5p mature miRNA |
| Sequence | 27 - UAUCACAAGGUGCGAUAAUUG - 47 |
| Evidence |
experimental
454 [1] |
Mature ppt-miR1076-3p
| Accession | MIMAT0005207 |
| Description | Physcomitrella patens ppt-miR1076-3p mature miRNA |
| Sequence | 177 - CCAAGCACUUAUCGCACCCUG - 197 |
| Evidence |
experimental
454 [1] |
References
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