Stem-loop smo-MIR160a

Accession

MI0006051

Description

Selaginella moellendorffii smo-MIR160a precursor miRNA

Literature search

1 open access papers mention smo-MIR160a
(3 sentences)

Sequence

aaaaucacucUGCCUGGCUCCCUGUAUGCCAucugggggggauuuaucagcugacgaugauaagcuccauagcuggcuuacggggagccacgcagaguuucucgcu
......(((((((.((((((((((((.((((.(((..((((.(((((((........))))))))))).))).)))).)))))))))))).)))))))........

Structure

--aaaauc       C            U    u   gg    a       gcu 
        acucUGC UGGCUCCCUGUA GCCA cug  gggg uuuauca   g
        ||||||| |||||||||||| |||| |||  |||| |||||||    
        ugagacg accgaggggcau cggu gau  ccuc gaauagu   a
ucgcucuu       c            u    c   -a    -       agc 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR160a

• Accession: MIMAT0005218
• Description: Selaginella moellendorffii smo-miR160a mature miRNA
• Sequence: 11 - UGCCUGGCUCCCUGUAUGCCA - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769