Stem-loop smo-MIR160b

Accession

MI0006052

Description

Selaginella moellendorffii smo-MIR160b precursor miRNA

Literature search

1 open access papers mention smo-MIR160b
(3 sentences)

Sequence

acaaacaaucccUGCCUGGCUCCCUGUAUGCCAccugagaagcccaccgaaguguuucggcaggauuccuagcuggcgugcggggagccaugcagagcuucucucuuu
...........((((.(((((((((((((((((.(((.(((.((..(((((....)))))..)).))).))).))))))))))))))))).)))).............

Structure

--acaaacaaucc    C                 c   a   g  ca     g 
             cUGC UGGCUCCCUGUAUGCCA cug gaa cc  ccgaa u
             |||| ||||||||||||||||| ||| ||| ||  |||||  
             gacg accgaggggcgugcggu gau cuu gg  ggcuu g
uuucucucuucga    u                 c   c   a  ac     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR160b

• Accession: MIMAT0005219
• Description: Selaginella moellendorffii smo-miR160b mature miRNA
• Sequence: 13 - UGCCUGGCUCCCUGUAUGCCA - 33
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769