miRBase entry: smo-MIR166a

Stem-loop smo-MIR166a


Accession
MI0006053
Description
Selaginella moellendorffii smo-MIR166a precursor miRNA
Gene family
MIPF0000004; MIR166


Sequence

agcaaguccuggauguggggauuguugccuggcucgagggaggcauuccuuugaucuuuucucuccugggaaguacuccagaagaacugugccagaaaugugcgcucUCGGACCAGGCUUCAUUCCCCucaucugagauugcacc
.((((.((.((((((.(((((.((..((((((.(((((((..((((...((((..(..((((...(((((......))))).))))..)...))))...)))).))))))).))))))..)).))))).)))))).))))))...

Structure
--a    g  c      u     u  uu      c       ag    ucc    -au uu    cuc     aa 
   gcaa uc uggaug gggga ug  gccugg ucgaggg  gcau   uuug   c  uucu   cuggg  g
   |||| || |||||| ||||| ||  |||||| |||||||  ||||   ||||   |  ||||   |||||   
   cguu ag gucuac CCCCU AC  CGGACC GGCUcuc  cgug   agac   g  aaga   gaccu  u
cca    -  a      u     U  UU      A       -g    uaa    cgu uc    --a     ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR166a

Accession MIMAT0005220
Description Selaginella moellendorffii smo-miR166a mature miRNA
Sequence 108 - UCGGACCAGGCUUCAUUCCCC - 128
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769