Stem-loop smo-MIR396

Accession

MI0006060

Description

Selaginella moellendorffii smo-MIR396 precursor miRNA

Sequence

ucucaugcuuUUCCACGGCUUUCUUGAACCuggugcucuuccaaggcaggaggaucagaaaacguugugguauuucucaucuccucgucucguccuuggucuccccuugaaagaaacucaccaguaagaguacgaaguucaagaaagcugugggaaacaauggccgga
..((((..(((((((((((((((((((((.(.((((((((((((((((.(((((..(((((((......)).)))))....))))).)...).))))))..........................)))))))).).)))))))))))))))))))))..)))).....

Structure

---uc    gc                     C g        --------------------------      - --- g     --uc     -  gu 
     ucau  uuUUCCACGGCUUUCUUGAAC u gugcucuu                          ccaagg c   a gagga    agaaa ac  u
     ||||  ||||||||||||||||||||| | ||||||||                          |||||| |   | |||||    ||||| ||   
     ggua  aaagggugucgaaagaacuug a caugagaa                          gguucc g   u cuccu    ucuuu ug  g
aggcc    ac                     a g        ugaccacucaaagaaaguuccccucu      u cuc g     cuac     a  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR396

• Accession: MIMAT0005227
• Description: Selaginella moellendorffii smo-miR396 mature miRNA
• Sequence: 11 - UUCCACGGCUUUCUUGAACC - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769