Stem-loop smo-MIR1088

Accession

MI0006072

Description

Selaginella moellendorffii smo-MIR1088 precursor miRNA

Sequence

cgagcaggccucuagaCAGAAGAAAGAGAGCACGCAUgaacacugccucugauugcagccucgauGCGUGCUCUUUUUCUUCUGUCgggagucccu
......((.((((.(((((((((((((((((((((((.....((((........)))).....))))))))))))))))))))))).)))).))..

Structure

cgagca  c    a                       gaaca    cuc 
      gg cucu gaCAGAAGAAAGAGAGCACGCAU     cugc   u
      || |||| |||||||||||||||||||||||     ||||    
      cc gagg CUGUCUUCUUUUUCUCGUGCGua     gacg   g
----uc  u    g                       gcucc    uua 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1088-5p

• Accession: MIMAT0005240
• Description: Selaginella moellendorffii smo-miR1088-5p mature miRNA
• Sequence: 17 - CAGAAGAAAGAGAGCACGCAU - 37
• Evidence: experimental ; 454 [1]

Mature smo-miR1088-3p

• Accession: MIMAT0005241
• Description: Selaginella moellendorffii smo-miR1088-3p mature miRNA
• Sequence: 66 - GCGUGCUCUUUUUCUUCUGUC - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769