Stem-loop smo-MIR1091

Accession

MI0006075

Description

Selaginella moellendorffii smo-MIR1091 precursor miRNA

Sequence

ggccucuggcauucgugCGGCAGUGAGGGAGGAUUUGCcaauaauccauagugccauaaaggaagauguugcugugguuccuucacugugucaugaagugccuggagguccuccuugauugcagcacgcauaaccgcaacauucacugcucuagccauggcaaccacauccuccuucaaugcaccauggaucgcuugcaaauccucccucacugcugcacgaauggaucccauuc
((..((...(((((((((((((((((((((((((((((.....((((((.((((....(((((.(((((((((((((((.(((((........)))))....(.((((....)))).).(((.....))).....(((........)))...))))))))))...))))).)))))....)))).)))))).....)))))))))))))))))))))))))))))))..))....

Structure

----  cc  ugg                             caaua      a    caua     a     ---          -----------------------------------------------------c     cug 
    gg  uc   cauucgugCGGCAGUGAGGGAGGAUUUGC     auccau gugc    aagga gaugu   ugcugugguu                                                      cuuca   u
    ||  ||   |||||||||||||||||||||||||||||     |||||| ||||    ||||| |||||   ||||||||||                                                      |||||    
    cc  ag   guaagcacgucgucacucccuccuaaacg     uaggua cacg    uuccu cuaca   acgguaccga                                                      gaagu   g
cuua  cu  ---                             uucgc      c    uaac     c     cca          ucucgucacuuacaacgccaauacgcacgacguuaguuccuccuggagguccgu     acu 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1091

• Accession: MIMAT0005244
• Description: Selaginella moellendorffii smo-miR1091 mature miRNA
• Sequence: 18 - CGGCAGUGAGGGAGGAUUUGC - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769