Stem-loop smo-MIR1095b

Accession

MI0006082

Description

Selaginella moellendorffii smo-MIR1095b precursor miRNA

Sequence

agguuugagcuugguaacaggggaaccuagacuguaauuugcugcuugcuuugauucccuucguccuuccaccgccauuccagucuuugcagucacuguuuccgaaaaguuucgagaaaaggaagaacacugcuuggacgcaagcucgucuugacucguuguggugguuuggauuugugcauuugcgccaaggauuucgaguuucuugucugcuuucgucuggaggagaucgauguaugcuugugcucUAGGUUCCCUUGUUUCCAAAUucaagucuggua
(((((((((.((((.((((((((((((((((..(((.......((.(((.((((((.(((((((((....((((((((.(.((((...(((((...(((.(((((..((((((...........))).)))..))))).))).))).))...)))).)..))))))))..))))..((((....))))((((((........)))))).............))))).)))))).))).))...))))))))))))))))))).)))).)))))))))....

Structure

----         c    u                cu   auuugcu  u   u      c     -----------------------------------------------    uucc        -u c    uuu  -   cac   u     aa   -   gaga 
    agguuugag uugg aacaggggaaccuaga  gua       gc ugc uugauu ccuuc                                               gucc    accgccau  c aguc   gc agu   ugu uccga  agu uuc    a
    ||||||||| |||| ||||||||||||||||  |||       || ||| |||||| |||||                                               ||||    ||||||||  | ||||   || |||   ||| |||||  ||| |||    a
    ucugaacuU AACC UUGUUCCCUUGGAUcu  cgu       cg aug agcuag ggagg                                               uagg    ugguggug  g ucag   ug ucg   acg agguu  uca aag    a
augg         A    U                --   ----guu  u   u      a     ucugcuuucgucuguucuuugagcuuuaggaaccgcguuuacguguu    --uu        uu c    uuc  c   --a   c     cg   c   aagg 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1095b

• Accession: MIMAT0005251
• Description: Selaginella moellendorffii smo-miR1095b mature miRNA
• Sequence: 249 - UAGGUUCCCUUGUUUCCAAAU - 269
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769