Stem-loop smo-MIR1099

Accession

MI0006086

Description

Selaginella moellendorffii smo-MIR1099 precursor miRNA

Sequence

gaugguucuucuuugucccaagcaUAUAGCAAUGGUGUUUUUGUCuacaaagugggugucuuggggcaggagaggcucgagaauuuuaguaccugaagaaaaucuaugcuaccuagaagagaguggacuagcagcuagggugaagguguagauuuuuucuacguacugaaauucuugauacaaccucucccaccccaaaacgccuaacuuguaagcaaaggcacuaucgcuguaugcuugggacaaagaaagacuauuaucaaguuaa
(((((((.((((((((((((((((((((((.(((((((((((((.(((((..(((((((.((((((..(((((((.((((((((((((((((.((.((((((((((((((.(((((..(..((....))..)..))))).....)))))))))))))).)).)))))))))))))))).....)))))))..)))))).)))))))..))))).))))))))))))).)))))))))))))))))))))).)))))))..........

Structure

----------       c                      A             C     ag       c      ca       ----c                c  a              ----a     aa ag  u 
          gaugguu uucuuugucccaagcaUAUAGC AUGGUGUUUUUGU uacaa  ugggugu uugggg  ggagagg     ucgagaauuuuaguac ug agaaaaucuaugcu     ccuag  g  ag g
          ||||||| |||||||||||||||||||||| ||||||||||||| |||||  ||||||| ||||||  |||||||     |||||||||||||||| || ||||||||||||||     |||||  |  ||  
          uuaucag aagaaacaggguucguaugucg uaucacggaaacg auguu  auccgca aacccc  ccucucc     aguucuuaaagucaug au uuuuuuagaugugg     ggauc  c  uc g
aauugaacua       a                      c             a     ca       a      ac       aacau                c  c              aagug     ga ga  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1099

• Accession: MIMAT0005255
• Description: Selaginella moellendorffii smo-miR1099 mature miRNA
• Sequence: 25 - UAUAGCAAUGGUGUUUUUGUC - 45
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769