Stem-loop smo-MIR319

Accession

MI0006090

Description

Selaginella moellendorffii smo-MIR319 precursor miRNA

Sequence

uuguucgcgggagcuuccuuuaguucaacucagguggagcuggagaugguccUGCUGCCGACUCAUGCAUCCgcguaccuuggaaaguuacaaugccaguuucagaaagagagcuucuuuuguccagugguagacgcuugcaugaugcgggagcugguucucucucgagcuuugaucgaccugccuuggacugaagggagcucccuuguucccac
..(..((.((((((((((((((((((((..(((((.(((((.((((.((.((.(((.(((..(((((((..((..(((((((((......(((....(((((........)))))....)))))))).))))..))..)))))))..))).))).))..)).)))).))).....)).)))))..)))))))))))))))))))).))..)....

Structure

--uu uu  c                    cu     g  -----   g    u  -u  U   G   AC       UC  cg    -     aaguua   ugcc     cag 
    g  cg gggagcuuccuuuaguucaa  caggu ga     gcu gaga gg  cc GCU CCG  UCAUGCA  Cg  uacc uugga      caa    aguuu   a
    |  || ||||||||||||||||||||  ||||| ||     ||| |||| ||  || ||| |||  |||||||  ||  |||| |||||      |||    |||||    
    c  gu cccucgagggaagucagguu  gucca cu     cga cucu uc  gg cga ggc  aguacgu  gc  augg gaccu      guu    ucgag   a
cacc uu  u                    cc     g  aguuu   g    c  uu  u   g   gu       uc  ag    u     ------   uucu     aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR319

• Accession: MIMAT0005260
• Description: Selaginella moellendorffii smo-miR319 mature miRNA
• Sequence: 53 - UGCUGCCGACUCAUGCAUCC - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769