Stem-loop smo-MIR1113

Accession

MI0006100

Description

Selaginella moellendorffii smo-MIR1113 precursor miRNA

Sequence

cuugucuuucuUGAGCAGUCAUAAGGUAGCCUuuguggaaagccccauucgauucguucgucucaaucagcaucagcaguaugacgaucucucgauucagagcaacaaaguuccuugcaggaaaacgagagaaaaagaagaaguugaaguugaagaagaagcuucaaaguucuuguggcauucuacauggacugccuuaugacugcucagcagcaagauuc
((((.((...(((((((((((((((((((((..(((((((.(((.............(((((.....(.((....)).)...)))))(((((((.(((...((((.........))))..)))..)))))))...(.(((((.((((((((........))))))))..))))).)))).))))))).)).))))))))))))))))))).))))))....

Structure

----    u  uuc                   -  Uu       a   -ccauucgauucguucgucucaaucagcaucagcaguaugacga       -a   aga    caa 
    cuug cu   uUGAGCAGUCAUAAGGUAG CC  uguggaa gcc                                            ucucucg  uuc   gcaa   a
    |||| ||   ||||||||||||||||||| ||  ||||||| |||                                            |||||||  |||   ||||   g
    gaac ga   gacucgucaguauuccguc gg  acaucuu cgg                                            agagagc  aag   cguu   u
cuua    -  --c                   a  -u       a   uguucuugaaacuucgaagaagaaguugaaguugaagaagaaaa       aa   -ga    ccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1113

• Accession: MIMAT0005271
• Description: Selaginella moellendorffii smo-miR1113 mature miRNA
• Sequence: 12 - UGAGCAGUCAUAAGGUAGCCU - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769