Stem-loop smo-MIR1103

Accession

MI0006103

Description

Selaginella moellendorffii smo-MIR1103 precursor miRNA

Sequence

gcccaugaacAAGAGUGCACCCCCUUUCCAAUcgguuaaaggucuuaggauaguuggaguuuaagcguccuuggguuugaauaguacugggcugggugaccucccgggaaguccaaauucaggagcuuacauuaaccccaaguauuccaaaacgcuuaaucgauUGGAAAAAGGAGGUGCAUUCUUGUucauaggccc
(((.(((((((((((((((((.(((((((((((((((((..((.((.(((((.((((.((((((((.((((.(((((((.((....(((((..((....)).)))))...)).))))))))))))))))....))).)))).))))).)).))..)))))))))))))..)))).))))))))))))))))).)))..

Structure

--   c                 C    --             ag  c  a     g    a   ----     g    u       a  agua     cu  g 
  gcc augaacAAGAGUGCACC CCUU  UCCAAUcgguuaa  gu uu ggaua uugg guu    uaagc uccu ggguuug au    cuggg  gg u
  ||| ||||||||||||||||| ||||  |||||||||||||  || || ||||| |||| |||    ||||| |||| ||||||| ||    |||||  ||  
  cgg uacuUGUUCUUACGUGG GGAA  AGGUuagcuaauu  ca aa cuuau aacc caa    auucg agga cuuaaac ug    ggccc  cc g
cc   a                 A    AA             cg  a  c     g    c   uuac     -    -       c  -aag     -u  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1103-5p

• Accession: MIMAT0005275
• Description: Selaginella moellendorffii smo-miR1103-5p mature miRNA
• Sequence: 11 - AAGAGUGCACCCCCUUUCCAAU - 32
• Evidence: experimental ; 454 [1]

Mature smo-miR1103-3p

• Accession: MIMAT0005276
• Description: Selaginella moellendorffii smo-miR1103-3p mature miRNA
• Sequence: 165 - UGGAAAAAGGAGGUGCAUUCUUGU - 188
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769