Stem-loop mmu-mir-467e

Accession

MI0006128

Symbol

MGI: Mir467e

Description

Mus musculus mmu-mir-467e precursor miRNA

Literature search

21 open access papers mention mmu-mir-467e
(68 sentences)

Sequence

24879 reads, 337 reads per million, 101 experiments

gccugugugcAUAAGUGUGAGCAUGUAUAUGUguguauauuuuaugcAUAUACAUACACACACCUAUAUacacaugcacacagacau
..((((((((((..(((((.(.(((((((((((((.......))))))))))))).).)))))..........))))))))))....

Structure

--gc          --------AA     A C             ua 
    cugugugcAU          GUGUG G AUGUAUAUGUgug  u
    ||||||||||          ||||| | |||||||||||||  a
    gacacacgua          CACAC C UACAUAUAcguau  u
uaca          cacaUAUAUC     A A             uu 

Annotation confidence High

Genome context

chr2: 10505721-10505807 [+]

Clustered miRNAs

24 other miRNAs are < 10 kb from mmu-mir-467e

Mature mmu-miR-467e-5p

• Accession: MIMAT0005293
• Description: Mus musculus mmu-miR-467e-5p mature miRNA
• Sequence: 11 - AUAAGUGUGAGCAUGUAUAUGU - 32
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-467e-3p

• Accession: MIMAT0005294
• Description: Mus musculus mmu-miR-467e-3p mature miRNA
• Sequence: 48 - AUAUACAUACACACACCUAUAU - 69
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009