Stem-loop rno-mir-147

Accession

MI0006130

Description

Rattus norvegicus rno-mir-147 precursor miRNA

Literature search

24 open access papers mention rno-mir-147
(59 sentences)

Sequence

10481 reads, 14.0 reads per million, 402 experiments

uaugaaucuaGUGGAAACACUUCUGCACAAACUcgauuuugaugccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagg
...((((.((((((((.((.(((((((((..((((....))).)....))))))))).)).)))))))).)))).....

Structure

--uau    c        A  C         --AA -   a 
     gaau uaGUGGAA CA UUCUGCACA    C Ucg u
     |||| |||||||| || |||||||||    | |||  
     uuua AUCGUCUU GU AAGGCGUGU    g agu u
ggauu    c        C  A         Gacc u   u 

Annotation confidence High

Genome context

chr3: 114775343-114775421 [+]

Mature rno-miR-147-5p

• Accession: MIMAT0052021
• Description: Rattus norvegicus rno-miR-147-5p mature miRNA
• Sequence: 11 - GUGGAAACACUUCUGCACAAACU - 33
• Evidence: experimental ; cloned [1]

Mature rno-miR-147-3p

• Accession: MIMAT0005297
• Description: Rattus norvegicus rno-miR-147-3p mature miRNA
• Sequence: 48 - GUGUGCGGAAAUGCUUCUGCUA - 69
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414