Stem-loop xtr-mir-146b

Accession

MI0006265

Description

Xenopus tropicalis xtr-mir-146b precursor miRNA

Sequence

ccaauggcagggcccggcucUGAGAACUGAAUUCCAUGGACUguuccacucacagcacccucaguccacaguguucagugcuccagucuggcugccacua
....(((((..(((.((((..(((.(((((((.(..(((((((..................)))))))..).))))))).))).)))).))))))))...

Structure

ccaa     gg   c    cU   A       U CA       uuccacuc 
    uggca  gcc ggcu  GAG ACUGAAU C  UGGACUg        a
    |||||  ||| ||||  ||| ||||||| |  |||||||         
    accgu  cgg cuga  cuc ugacuug g  accugac        c
-auc     --   u    -c   g       u ac       ucccacga 

Annotation confidence Not enough data

Genome context

chr1: 8024073-8024172 [+]

Mature xtr-miR-146b

• Accession: MIMAT0005563
• Description: Xenopus tropicalis xtr-miR-146b mature miRNA
• Sequence: 21 - UGAGAACUGAAUUCCAUGGACU - 42
• Evidence: not_experimental

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112