Stem-loop bna-MIR397a

Accession

MI0006445

Description

Brassica napus bna-MIR397a precursor miRNA

Literature search

4 open access papers mention bna-MIR397a
(6 sentences)

Sequence

gaacaUCAUUGAGUGCAGCGUUGAUGUgauuuacuucucuuuuucauuguugaauggauuaaagcaauuuacaucaacguuggcucaauuauguuu
((((((.(((((((.((((((((((((((.((.(((.(((..((((....)))).)))...))).)).))))))))))))))))))))).))))))

Structure

      C       G              u  a   --c   uu    u 
gaacaU AUUGAGU CAGCGUUGAUGUga uu cuu   ucu  uuca u
|||||| ||||||| |||||||||||||| || |||   |||  ||||  
uuugua uaacucg guugcaacuacauu aa gaa   agg  aagu g
      u       -              u  c   auu   -u    u 

Annotation confidence Not enough data

Genome context

EM:BH653338: 89-184 [-]

Mature bna-miR397a

• Accession: MIMAT0005600
• Description: Brassica napus bna-miR397a mature miRNA
• Sequence: 6 - UCAUUGAGUGCAGCGUUGAUGU - 27
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856