Stem-loop bna-MIR169g

Accession

MI0006463

Description

Brassica napus bna-MIR169g precursor miRNA

Literature search

11 open access papers mention bna-MIR169g
(42 sentences)

Sequence

gagaaacggugacaugaagaaugagaaguuguguggUAGCCAAGGAUGACUUGCCUGCgucuuuaacaccauaucaaagacuuuaucgauagucucugaguugguuaggcuguaggcagucuccuuggcuauucagacacuccucuuucuccucauuucacauuucuc
((((((..((((.((((((((.(((.(((.((.(((((((((((((.((((.((((((((((.....((((..(((.(((((........))))).)))..)))).)))).)))))))))))))))))))).))).))))).))).))))..)))).)))).))))))

Structure

      cg    c    --    u   a   u  g   -          U    U      -    uuaac    ua   a     uua 
gagaaa  guga auga  agaa gag agu gu ugg UAGCCAAGGA GACU GCCUGC gucu     acca  uca agacu   u
||||||  |||| ||||  |||| ||| ||| || ||| |||||||||| |||| |||||| ||||     ||||  ||| |||||    
cucuuu  cacu uacu  ucuu cuc uca ca acu aucgguuccu cuga cggaug cgga     uggu  agu ucuga   c
      -a    u    cc    u   c   -  g   u          -    -      u    ----u    ug   c     uag 

Annotation confidence Not enough data

Genome context

EM:BZ041682: 86-253 [+]

Mature bna-miR169g

• Accession: MIMAT0005618
• Description: Brassica napus bna-miR169g mature miRNA
• Sequence: 37 - UAGCCAAGGAUGACUUGCCUGC - 58
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856