miRBase entry: mml-mir-509-1

Stem-loop mml-mir-509-1


Accession
MI0006613
Description
Macaca mulatta mml-mir-509-1 precursor miRNA


Sequence

34048 reads, 78.0 reads per million, 60 experiments
cauguugugugugguacccUACUGCAGGCAGUGGCAAUUauguauaguuaaaaaUGAUUGGUAUGUCUGUGGGUAGAguaaugcaugacacaug
(((((.(((((((.(((.((((((((((((.((.(((((((............))))))).))))))))).))))).))).))))).)))))))

Structure
     u  -     g   c     -       G  G       guaua 
caugu gu gugug uac cUACU GCAGGCA UG CAAUUau     g
||||| || ||||| ||| ||||| ||||||| || |||||||      
guaca ca uacgu aug GAUGG UGUCUGU AU GUUAGUa     u
     -  g     a   A     G       -  G       aaaau 


Annotation confidence Medium
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Genome context
X: 143294056-143294149 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-509-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-509-1-5p

Accession MIMAT0051617
Description Macaca mulatta mml-miR-509-1-5p mature miRNA
Sequence 20 - UACUGCAGGCAGUGGCAAUU - 39
Evidence not_experimental

Mature mml-miR-509-1-3p

Accession MIMAT0005765
Description Macaca mulatta mml-miR-509-1-3p mature miRNA
Sequence 55 - UGAUUGGUAUGUCUGUGGGUAGA - 77
Evidence not_experimental

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617