Stem-loop ptr-mir-508

Accession

MI0006624

Description

Pan troglodytes ptr-mir-508 precursor miRNA

Literature search

1 open access papers mention ptr-mir-508
(24 sentences)

Sequence

31085 reads, 1508.0 reads per million, 20 experiments

ugaguguagugcccUACUCCAGAGGGCAUCAGUCAUGUaaacuaaaacaUGAUUGUAGCCUUUUUGAGUAGAguaauacacauca
((((((((.(((.((((((.(((((((..(((((((((........)))))))))..))))))).)))))).))).))))).)))

Structure

   -     g   c      C       AU         aaa 
uga gugua ugc cUACUC AGAGGGC  CAGUCAUGU   c
||| ||||| ||| |||||| |||||||  |||||||||    
acu cacau aug GAUGAG UUUUCCG  GUUAGUaca   u
   a     a   A      U       AU         aaa 

Annotation confidence High

Genome context

chrX: 146968308-146968392 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ptr-mir-508

Mature ptr-miR-508-5p

• Accession: MIMAT0052254
• Description: Pan troglodytes ptr-miR-508-5p mature miRNA
• Sequence: 15 - UACUCCAGAGGGCAUCAGUCAUGU - 38
• Evidence: not_experimental

Mature ptr-miR-508-3p

• Accession: MIMAT0005772
• Description: Pan troglodytes ptr-miR-508-3p mature miRNA
• Sequence: 50 - UGAUUGUAGCCUUUUUGAGUAGA - 72
• Evidence: not_experimental

References

1. PubMed ID: 17416744
   Rapid evolution of an X-linked microRNA cluster in primates
   "Zhang R, Peng Y, Wang W, Su B"
   "Genome Res (2007) 17:612-617