Accession
MI0006625
Description
Pan troglodytes
ptr-mir-509a-1 precursor miRNA
Sequence
53636
reads,
2253.0
reads per million, 22 experiments
caugcugugugugguacccUACUGCAGACAGUGGCAAUCAUguauaauuaaaaaUGAUUGGUACGUCUGUGGAUAGAguacugcaugacacaug
((((.((((((((((((.(((((((((((.(((.(((((((............))))))).))))))))))).))).))))))))).)))))))
((((.((((((((((((.(((((((((((.(((.(((((((............))))))).))))))))))).))).))))))))).)))))))
Structure
c - c - A G guaua
caug ugu gugugguac cUA CUGCAGAC GUG CAAUCAU a
|||| ||| ||||||||| ||| |||||||| ||| |||||||
guac aca uacgucaug GAU GGUGUCUG CAU GUUAGUa u
- g A A - G aaaau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrX: 146990041-146990134 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-509a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-509a-5p
| Accession | MIMAT0052255 |
| Description | Pan troglodytes ptr-miR-509a-5p mature miRNA |
| Sequence | 20 - UACUGCAGACAGUGGCAAUCAU - 41 |
| Evidence | not_experimental |
Mature ptr-miR-509a-3p
| Accession | MIMAT0005773 |
| Description | Pan troglodytes ptr-miR-509a-3p mature miRNA |
| Sequence | 55 - UGAUUGGUACGUCUGUGGAUAGA - 77 |
| Evidence | not_experimental |
References
|
