Stem-loop oan-mir-1332

Accession

MI0006675

Description

Ornithorhynchus anatinus oan-mir-1332 precursor miRNA

Sequence

362 reads, 7 reads per million, 5 experiments

cccgaccaaucaGAGGCCAUCUUCAACCGAUCGGgaacagucuccAAUUGGUUAGAGGUGGUCUCUGacuggccaaggg
(((..(((.((((((((((((((.(((((((..(((......))).))))))).)))))))))))))).)))....)))

Structure

   --ga   a              C       CG   ac 
ccc    cca ucaGAGGCCAUCUU AACCGAU  Gga  a
|||    ||| |||||||||||||| |||||||  |||   
ggg    ggu aGUCUCUGGUGGAG UUGGUUA  ccu  g
   aacc   c              A       -A   cu 

Annotation confidence Low

Genome context

2: 28891525-28891603 [+]

Mature oan-miR-1332-3p

• Accession: MIMAT0006819
• Description: Ornithorhynchus anatinus oan-miR-1332-3p mature miRNA
• Sequence: 46 - AAUUGGUUAGAGGUGGUCUCUG - 67
• Evidence: experimental ; Illumina [1-2]

Mature oan-miR-1332-5p

• Accession: MIMAT0026751
• Description: Ornithorhynchus anatinus oan-miR-1332-5p mature miRNA
• Sequence: 13 - GAGGCCAUCUUCAACCGAUCGG - 34
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45