Stem-loop oan-mir-1333

Accession

MI0006678

Description

Ornithorhynchus anatinus oan-mir-1333 precursor miRNA

Sequence

15 reads, 1 reads per million, 4 experiments

uucuagucuguuuacgaugcuaccgauuccuguuuauuuguuuucgauguccgucuccccgcuuccgUCAAAACAGACAAACAGGAAUcgguagcaucguaauuaaauagaa
.((((......((((((((((((((((((((((((.((((((((.((((...((......))...)))))))))))).)))))))))))))))))))))))).....)))).

Structure

u    gucugu                        a        c    ucc  cu 
 ucua      uuacgaugcuaccgauuccuguuu uuuguuuu gaug   gu  c
 ||||      |||||||||||||||||||||||| |||||||| ||||   ||   
 agau      aaugcuacgauggcUAAGGACAAA AGACAAAA CUgc   cg  c
a    -aaauu                        C        -    cuu  cc 

Annotation confidence Not enough data

Genome context

2: 43430035-43430146 [-]

Mature oan-miR-1333

• Accession: MIMAT0006824
• Description: Ornithorhynchus anatinus oan-miR-1333 mature miRNA
• Sequence: 68 - UCAAAACAGACAAACAGGAAU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004