Stem-loop oan-mir-1334

Accession

MI0006680

Description

Ornithorhynchus anatinus oan-mir-1334 precursor miRNA

Sequence

12 reads, 1 reads per million, 2 experiments

cagcacaucugugagacugcugcggucccacccagaggaaaucacuuccacucuguguuuucaaauucaaUUAGGAAGUGAUUUCUUCAGGCuggaaagcaagucauccuggcug
((((.((...(.((((((..(((..(((..((..(((((((((((((((....((.(((....))).))....))))))))))))))).))..)))..))))))).)))))))))

Structure

    a  ucu u  -    gc   gg   ca  ca               acuc  u   u 
cagc ca   g ga gacu  ugc  ucc  cc  gaggaaaucacuucc    ug guu u
|||| ||   | || ||||  |||  |||  ||  |||||||||||||||    || |||  
gucg gu   c cu cuga  acg  agg  GG  CUUCUUUAGUGAAGG    ac uaa c
    -  --- -  a    --   aa   uC  -A               AUUa  u   a 

Annotation confidence Not enough data

Genome context

3: 43390605-43390719 [-]

Mature oan-miR-1334

• Accession: MIMAT0006827
• Description: Ornithorhynchus anatinus oan-miR-1334 mature miRNA
• Sequence: 71 - UUAGGAAGUGAUUUCUUCAGGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004